.. _file-formats:

File Formats
======================

**ORFanage** is designed to use simple and common file formats.

.. _gtf-file:

Re-Annotated GTF Output
-------------------------

.. csv-table:: Re-annotated GTF Output (TAB-separated)
   :file: ../content/csvs/gtf.t.csv
   :header-rows: 0
   :stub-columns: 1


.. csv-table:: Attributes (column #9) (TAB-separated)
   :file: ../content/csvs/attributes.csv
   :header-rows: 0
   :stub-columns: 1


.. _stats-file:

Extended Stats Output (TSV)
---------------------------

.. csv-table:: Extended Output (TSV)
   :file: ../content/csvs/stats.t.csv
   :header-rows: 0
   :stub-columns: 1